BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027F09LP1|AL428764
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig847 1678 0.0
>3x_Contig847
Length = 2949
Score = 1678 bits (846), Expect = 0.0
Identities = 867/870 (99%), Gaps = 3/870 (0%)
Strand = Plus / Minus
Query: 1 atcccattttattctatgatgatttcattctatttgaagatgaattggcagacaacggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2298 atcccattttattctatgatgatttcattctatttgaagatgaattggcagacaacggta 2239
Query: 61 tcagtatgctttcgataaaacttagggtaatggcagagagacttcttttattatgcagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2238 tcagtatgctttcgataaaacttagggtaatggcagagagacttcttttattatgcagat 2179
Query: 121 tcttcctaagagtcgatgaggtcttgtttaaaatcattgatacaagaatatatgtcgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2178 tcttcctaagagtcgatgaggtcttgtttaaaatcattgatacaagaatatatgtcgaat 2119
Query: 181 tcaatgaggaccttgttgtacgggaatggaaatatatggaggatgattacaagacagtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2118 tcaatgaggaccttgttgtacgggaatggaaatatatggaggatgattacaagacagtat 2059
Query: 241 tgaataaatgtagattaaattcaaacgatcctaagaaatctttgagagacagcaactggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2058 tgaataaatgtagattaaattcaaacgatcctaagaaatctttgagagacagcaactggg 1999
Query: 301 ttgcgtctgtattacctttgaaggagcgcgtatgtgaagtattgaggaaaaaagaagata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1998 ttgcgtctgtattacctttgaaggagcgcgtatgtgaagtattgaggaaaaaagaagata 1939
Query: 361 tagaagaagttgtcgaataagcactcaccgctactgtcgaattgacagcacttttggaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1938 tagaagaagttgtcgaataagcactcaccgctactgtcgaattgacagcacttttggaaa 1879
Query: 421 attcaagaaagagttgatttgctcattcatgaatctacctatttaattatgttacccaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1878 attcaagaaagagttgatttgctcattcatgaatctacctatttaattatgttacccaaa 1819
Query: 481 aggaataatatacaaatctcgtaatacatgtgataatattatatacacactattcaagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1818 aggaataatatacaaatctcgtaatacatgtgataatattatatacacactattcaagtt 1759
Query: 541 tctgaatccaaaaggtatctggatacgttagtgatttctctgttatcattattttgctga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1758 tctgaatccaaaaggtatctggatacgttagtgatttctctgttatcattattttgctga 1699
Query: 601 agttcttgcaattttcttacagctaattgagttaattcaggttttttattcagtttctga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1698 agttcttgcaattttcttacagctaattgagttaattcaggttttttattcagtttctga 1639
Query: 661 gatgtcttcaatacaataccccaacctttcacgtaggcttctgccaactcaacagatctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1638 gatgtcttcaatacaataccccaacctttcacgtaggcttctgccaactcaacagatctc 1579
Query: 721 aacgcatttgataaacttgattgcaaagcagcttcagggtcagaatctgattgagacttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1578 aacgcatttgataaacttgattgcaaagcagcttcagggtcagaatctgattgagacttc 1519
Query: 781 aagtaatgcaaataagctaattgaccaaatgcttcataactgaacggca-cccaattatg 839
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1518 aagtaatgcaaataagctaattgaccaaatgcttcataactgaacggcaccccaattatg 1459
Query: 840 acttctt-catgc-atatattgcttgacgt 867
||||||| ||||| ||||||||||||||||
Sbjct: 1458 acttcttccatgcaatatattgcttgacgt 1429
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7956
Number of Sequences: 1807
Number of extensions: 7956
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)